PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OIT27978 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
||||||||
Family | B3 | ||||||||
Protein Properties | Length: 172aa MW: 19712.3 Da PI: 4.4069 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 57.1 | 3.4e-18 | 18 | 105 | 2 | 97 |
EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 fk+ + + +l++p f++ ++g+ + +led+ g+sW+v + +k+++ +++ +GW +Fv n+L+ g+f++F++ g+s f +vk++ OIT27978 18 FKIY--HPQICNFQLRIPPAFLKFFNGD--IPSNYMLEDLAGESWKVVV--EKNDNDFFFMGGWPDFVWNNNLEFGEFLTFSYAGNSHF--YVKIY 105 5555..66677899********999777..4557***************..**********************************9999..88876 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 172 aa Download sequence |
MVTSIEQVTI PDHLPEFFKI YHPQICNFQL RIPPAFLKFF NGDIPSNYML EDLAGESWKV 60 VVEKNDNDFF FMGGWPDFVW NNNLEFGEFL TFSYAGNSHF YVKIYGINGS LKRDVTAINE 120 PELHPLDEEI VHEIGSSARP VDQALNESGD LVVSVTSFDI VIKPSYIRKS AW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G66980.1 | 3e-18 | B3 family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | OIT27978 |