PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT27803
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 221aa    MW: 25137 Da    PI: 8.6988
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT27803genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.61.3e-1797147255
       AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
               +y GVr+++ +g+++AeIrdp     k +r +lg++ t+e+Aa a+++a+ k++g
  OIT27803  97 RYIGVRRRP-WGKFAAEIRDP---ErKGARLWLGTYETPEDAASAYDQAAFKIRG 147
               699******.**********7...3235*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    
MEKKMNPVNA TFSFSELDFL EIENHLLNYD SDFSGLPNSP SSSFGSSPSA ENSLDTSLWD  60
ENFEETIPHL EEKSESDEET KGHVVARETN APQDWRRYIG VRRRPWGKFA AEIRDPERKG  120
ARLWLGTYET PEDAASAYDQ AAFKIRGSRA RLNFPHLIGS NMPKPARVTA RRSRRRSPEP  180
SSSSCTSSSE NGTRKRKIDL INSIAKAKFI RHSCWNLQML L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.12e-36ERF family protein