PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT27775 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | MYB_related | ||||||||
Protein Properties | Length: 240aa MW: 27638.9 Da PI: 7.1945 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 44.5 | 3.5e-14 | 110 | 154 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ +++ + ++G+g+W+ I+++m Rt+ q+ s+ qky OIT27775 110 PWTEEEHRRFLMGLDKYGKGDWRNISKKMVISRTPTQVASHAQKY 154 8*****************************99************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 240 aa Download sequence |
METIFPTSSS WMMQQNKSSI WTKEENKLFE SAIAIYDENT PNRWFQVADM IPGKSVLDVM 60 MQYQELAADV CDIEAGLVPN PGYFASSDCG LQTFRKRGRS SDQERKKGVP WTEEEHRRFL 120 MGLDKYGKGD WRNISKKMVI SRTPTQVASH AQKYYQRQLS GCKDKRRPSI HDITTFHFVA 180 DDTSQNNINS KLHKFTTTTD VVKYWNSSSD EHLMSYGSST VAYPYELSSQ SWDGHGAIWD |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 95 | 107 | RKRGRSSDQERKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G11280.1 | 9e-82 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT27775 |