PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT27770
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 218aa    MW: 24544.7 Da    PI: 8.4792
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT27770genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.23.5e-172877255
       AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
               ykG+r +k +g+WvAeIr+p   +kr r++lg++ t+  Aa+a++ a  +l+g
  OIT27770 28 PYKGIRMRK-WGKWVAEIREP---NKRSRIWLGSYSTPVAAARAYDTAVYYLRG 77
              59*****99.**********9...336*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    
MEVGGGGQSR GVASSGGCCG AKRKNERPYK GIRMRKWGKW VAEIREPNKR SRIWLGSYST  60
PVAAARAYDT AVYYLRGPSA RLNFPELLGG DGGLNDLSAA SIRKKAIEVG AQVDAIQNSL  120
ATHHDHGHGH DHREQKVHCE TASPSELKPC WFQEKPDLNK KPEPEDPEQD YWWIQVGNGR  180
GHLERVWMRE TTLALQWLEF GAKWVICETL CYTNCEQK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G23340.12e-48ERF family protein