PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT27661 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | ERF | ||||||||
Protein Properties | Length: 253aa MW: 28612.9 Da PI: 7.7 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 62.5 | 9.3e-20 | 129 | 178 | 3 | 56 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkklege 56 y+GVr+++ +g+W+AeIrdp + +r++lg+f taeeAa+a+++ + +++ge OIT27661 129 YRGVRQRP-WGKWAAEIRDP-----HkaQRVWLGTFITAEEAARAYDKKAIEFRGE 178 9*******.**********7.....337*************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 253 aa Download sequence |
MSNIHYLEFQ DNRFSQESQL QDNKKCSITH KLTQDQEFYF MVSALRHVIS GADGKTDGEA 60 AQLLREVENA SAATSASILP RRSTVEPTVS ATTYLACHIG NTTTSFHVKR ENLELQKGRR 120 RRRNTKKEYR GVRQRPWGKW AAEIRDPHKA QRVWLGTFIT AEEAARAYDK KAIEFRGEKA 180 KTNFPISEYA AAATTVTGHN NKLPMVVEEL QVQNGVTVAG DDNGESSMQN GDDFWDTLED 240 DGLVKWITKD MSL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33710.1 | 1e-30 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT27661 |