PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT27634 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | ERF | ||||||||
Protein Properties | Length: 241aa MW: 27162.3 Da PI: 5.7632 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.3 | 1.9e-18 | 92 | 142 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++GVr+++ +g+++AeIrd + ng r++lg+f+++e Aa a+++a+ +++g OIT27634 92 SFRGVRRRP-WGKFAAEIRDSTRNG--VRVWLGTFDSPEAAALAYDQAAFSMRG 142 59*******.**********44465..*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 241 aa Download sequence |
MDSSSCSSHF FYPMNSDLSS DSSWEWSNLN STNSLPFNLN DSEEMLLFGV LTNTAQETTS 60 ETVTSYHVKE EEVSSRSKVI KEIEEKPAKE KSFRGVRRRP WGKFAAEIRD STRNGVRVWL 120 GTFDSPEAAA LAYDQAAFSM RGTSAILNFP VETVQESLRD MKCHVDKDCS PVVALKKRHS 180 MRKRSLNSKK ISNSNSKVVR EVKMENVNVV VFEDLGADYL EQLLSSSSSD QSSCNEAFLP 240 W |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23240.1 | 2e-64 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT27634 |