PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OIT27632 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 157aa MW: 17713.7 Da PI: 9.7416 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 62.6 | 8.3e-20 | 27 | 78 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkklege 56 +y+GVr+++ +g+++AeIrdp r r +lg+f+taeeAa+a+++a+ +l+g+ OIT27632 27 KYRGVRRRP-WGKFAAEIRDPA----RpsSRQWLGTFDTAEEAARAYDRAAFNLRGH 78 8********.**********83....4669*************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 157 aa Download sequence |
MEGNSSRGKK AMQEKEGSNN KGKEEVKYRG VRRRPWGKFA AEIRDPARPS SRQWLGTFDT 60 AEEAARAYDR AAFNLRGHLA TLNFPNEYYN QLQYPPLYYR NSFSSPTNVA SNPRGSLENG 120 NSSSSTGKAK EIIELECLDN SVLEELLGAE DSKMKRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G23230.1 | 7e-30 | ERF family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | OIT27632 |