PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT27582
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family WRKY
Protein Properties Length: 361aa    MW: 40725.9 Da    PI: 5.595
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT27582genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY919.2e-29133193259
               --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
               dDgy+WrKYGqK++ g+++prsYYrCt++   +C+++k+v+rs++dp+v+eitY+g+H+++
  OIT27582 133 DDGYSWRKYGQKDILGAKYPRSYYRCTYRhmqNCWTTKQVQRSDDDPTVFEITYKGSHTCH 193
               8**************************99899***************************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 361 aa     Download sequence    
MDCAFNWEYN TLINELTQGI EYTKQLRSYL SSMASTSEHQ ELLLQKILSS YEQSLLILKC  60
SGSAVQSPQP VTPTCGAIES SVSVDGSPKS EDKKRSFKDH QELINVSKKR KSQPTWTEQV  120
KVSAETGFEG PTDDGYSWRK YGQKDILGAK YPRSYYRCTY RHMQNCWTTK QVQRSDDDPT  180
VFEITYKGSH TCHQASNSAL QPKSPENQEF KKQANYQTGQ YSNEILMNLR ANLRVDTNDL  240
DKNETTAACS FSFPPTFSGL TDENRHFQIS HVDENLMIGG GYSPSFVSPT TPESNYFSIS  300
SSCQMNGFGM VHNVHRSESD LTDIFSANTS STSSPIVGGE FSLDHFELDP NFPFDNPRFF  360
S
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
193111KKRSFKDHQELINVSKKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.11e-65WRKY family protein