PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT27582

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

WRKY

Protein Properties

Length: 361aa MW: 40725.9 Da PI: 5.595

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT27582	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	91	9.2e-29	133	193	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 dDgy+WrKYGqK++ g+++prsYYrCt++ +C+++k+v+rs++dp+v+eitY+g+H+++ OIT27582 133 DDGYSWRKYGQKDILGAKYPRSYYRCTYRhmqNCWTTKQVQRSDDDPTVFEITYKGSHTCH 193 8************************99899*************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 361 aa Download sequence
MDCAFNWEYN TLINELTQGI EYTKQLRSYL SSMASTSEHQ ELLLQKILSS YEQSLLILKC 60 SGSAVQSPQP VTPTCGAIES SVSVDGSPKS EDKKRSFKDH QELINVSKKR KSQPTWTEQV 120 KVSAETGFEG PTDDGYSWRK YGQKDILGAK YPRSYYRCTY RHMQNCWTTK QVQRSDDDPT 180 VFEITYKGSH TCHQASNSAL QPKSPENQEF KKQANYQTGQ YSNEILMNLR ANLRVDTNDL 240 DKNETTAACS FSFPPTFSGL TDENRHFQIS HVDENLMIGG GYSPSFVSPT TPESNYFSIS 300 SSCQMNGFGM VHNVHRSESD LTDIFSANTS STSSPIVGGE FSLDHFELDP NFPFDNPRFF 360 S

Sequence ? help Back to Top

Protein Sequence Length: 361 aa Download sequence

MDCAFNWEYN TLINELTQGI EYTKQLRSYL SSMASTSEHQ ELLLQKILSS YEQSLLILKC  60
SGSAVQSPQP VTPTCGAIES SVSVDGSPKS EDKKRSFKDH QELINVSKKR KSQPTWTEQV  120
KVSAETGFEG PTDDGYSWRK YGQKDILGAK YPRSYYRCTY RHMQNCWTTK QVQRSDDDPT  180
VFEITYKGSH TCHQASNSAL QPKSPENQEF KKQANYQTGQ YSNEILMNLR ANLRVDTNDL  240
DKNETTAACS FSFPPTFSGL TDENRHFQIS HVDENLMIGG GYSPSFVSPT TPESNYFSIS  300
SSCQMNGFGM VHNVHRSESD LTDIFSANTS STSSPIVGGE FSLDHFELDP NFPFDNPRFF  360
S

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	93	111	KKRSFKDHQELINVSKKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G11070.1	1e-65	WRKY family protein

Link Out ? help Back to Top
Ensembl	OIT27582