PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT27382 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | MYB_related | ||||||||
Protein Properties | Length: 106aa MW: 12265.8 Da PI: 5.0128 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 38.6 | 2.6e-12 | 26 | 68 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 ++ +++eE+ l+++ +++ G++ W++Ia +++ gRt++++ +w+ OIT27382 26 KLEFSEEEEMLIAKMFNLVGKR-WSLIAGRIP-GRTPEEIEKYWN 68 678*******************.*********.***********8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 106 aa Download sequence |
MADELSSTSD NTFLVSAETT TEETSKLEFS EEEEMLIAKM FNLVGKRWSL IAGRIPGRTP 60 EEIEKYWNSR YVNHKPEKRL KISSSINEER RKLETTSRNL ETLPAI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46410.1 | 2e-15 | MYB_related family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT27382 |