PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT27149 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | MYB_related | ||||||||
Protein Properties | Length: 95aa MW: 10941.3 Da PI: 9.7336 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 25.7 | 2.6e-08 | 4 | 49 | 3 | 45 |
SS-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrwq 45 +WTt +++ +a ++ +g + Ia+++g g++ ++++ ++ OIT27149 4 NWTTKQNKRFEEALVMYDKGtsseRLQNIAKYVG-GKSVEEVRRHYE 49 8*********************************.**********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 95 aa Download sequence |
MATNWTTKQN KRFEEALVMY DKGTSSERLQ NIAKYVGGKS VEEVRRHYEL LVKDITQIEN 60 GQVPLPNYRT NTAPETNARG GYPNEQRLLK NLSLQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G39250.1 | 8e-31 | MYB_related family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT27149 |