PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT27035
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family B3
Protein Properties Length: 351aa    MW: 41477.6 Da    PI: 9.051
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT27035genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B351.22.3e-1625116198
               EEEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
        B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
               ffk++    +  ++ l++p kf+ +  + + +     +l+ +sg++W+v++  r+ ++ y++ +GW+ Fvk++ L+e D +vFk+++ s+f   v++f+
  OIT27035  25 FFKIM---VNDFRCKLRIPHKFVLNLkD-SYKLLGRKILRGPSGNTWTVEV-KRREDDDYMFCNGWELFVKDHCLEEADLLVFKMKSFSSF--DVGIFD 116
               56666...3456788********88853.4444446678************.4777777*************************7654888..999987 PP
2B356.16.6e-18238323189
               EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
        B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltled.esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 
               ff  ++++ +  +g+l lpkk a++++ kk e  t+ l+  +sgr+W v +  + ++++ v+++GW++Fv +n+++e D++vF+l +  +
  OIT27035 238 FFLMTMQPTHVYLGQLKLPKKWANRYMRKKYE--TINLRVpSSGRRWAVAV--SYRQEGLVMQSGWEDFVMDNDVEEFDICVFELAQGGK 323
               566677888888999***********988666..7888886789*******..777778*************************986543 PP
Sequence ? help Back to Top
Protein Sequence    Length: 351 aa     Download sequence    
MATICERCKV IEKQKYWEEF HKHQFFKIMV NDFRCKLRIP HKFVLNLKDS YKLLGRKILR  60
GPSGNTWTVE VKRREDDDYM FCNGWELFVK DHCLEEADLL VFKMKSFSSF DVGIFDLSAC  120
EKEETFFVNK NRNPCKHPDE HTTDQEESSE TEHSSEEESY GKKYAFHSSQ LISKGKKMKK  180
ILIAKQQINR KKECTPSSLR KKNIEPEEKM PIFSNRHQVT KREEVFQQAS RHKSSVPFFL  240
MTMQPTHVYL GQLKLPKKWA NRYMRKKYET INLRVPSSGR RWAVAVSYRQ EGLVMQSGWE  300
DFVMDNDVEE FDICVFELAQ GGKHNLIPVV LDVYIHRVNM RPSCSNSTSI D
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.13e-26B3 family protein