PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT27015
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 364aa    MW: 41300.1 Da    PI: 6.967
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT27015genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.95.3e-18152202256
       AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                y+GVr++  +g+WvAeIr p +   r r++lg++ tae Aa a+++a+ kl+ge
  OIT27015 152 LYRGVRQRQ-WGKWVAEIRLPQN---RMRVWLGTYETAEAAAYAYDRAAYKLRGE 202
               59****999.**********954...5**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 364 aa     Download sequence    
MNKIQENMCK IQENMSYNYD EAAQIRSSLS QILLTSSTNT LDSIFSHCQQ QQTTTVTSQS  60
RTIFSDCQES NNQMATKNVF EPLGSSVYSN NNYTSVPDNL GSSVYLRQKD LLQKFWEENR  120
ANGTNPTTST QIPHQNTSLH SGNYVCPSKK KLYRGVRQRQ WGKWVAEIRL PQNRMRVWLG  180
TYETAEAAAY AYDRAAYKLR GEYARLNFPN IRDDTSMLGF GDSTKMNAVK NSVDAKIQAI  240
CQKVKRERAK KGVKKIVESD KKVEKNVDLE SSSCSSSIVC NESWSNSDVI SQSTSEDGLW  300
KSENSPCSVL DDPHVGPKND DPNCYITSIT HQFERPMMEL EFEDCSLARM PSFDPELIWS  360
ILAN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G64380.11e-59ERF family protein