PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT26979 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | ERF | ||||||||
Protein Properties | Length: 152aa MW: 17453.5 Da PI: 9.5176 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.2 | 2.3e-19 | 26 | 77 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 +y+GVr+++ +g+++AeIrdp+ +g +r +lg+f+tae+Aa+a+++ + +l+g+ OIT26979 26 KYRGVRRRP-WGKFAAEIRDPTRQG--ARQWLGTFDTAEDAARAYDKTAFNLRGH 77 8********.**********96544..**************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 152 aa Download sequence |
MEGSSSKGKK AMQEKESGNK GKEEIKYRGV RRRPWGKFAA EIRDPTRQGA RQWLGTFDTA 60 EDAARAYDKT AFNLRGHLAT LNFPNEYYSQ LSNPPYHYRT TSFNIINPIR RGLEKGNSSI 120 GNQDKEIIEF EYLDDSVLEE LLGSEEPKMT RK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23230.1 | 3e-48 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT26979 |