PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT26953 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | MYB_related | ||||||||
Protein Properties | Length: 245aa MW: 27489.9 Da PI: 10.7453 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 45.3 | 2e-14 | 85 | 129 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE++l++ + ++ G+g+W+ I+r + k+Rt+ q+ s+ qky OIT26953 85 PWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKY 129 8*******************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence |
MSNQYGNKEH EFQEISAGKG KGFMLFGVRV MEAGTSFRKS ASMNNLALFD KQHQDSNVDD 60 VAAGYVSDDV VHPSARSRER KRGVPWTEEE HKLFLLGLQK VGKGDWRGIS RNFVKTRTPT 120 QVASHAQKYF LRRNNNNRRR RRSSLFDITT HMVQSVVKLE DKQMNQNTIE SSANNLTIGL 180 NKSVKPIRPI PFLPPSSKMA NLNLNKTYVQ ESDEKSPPAR HSSAFQSMSS GFNGNTSGDS 240 IISVA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G70000.2 | 2e-62 | MYB_related family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT26953 |