PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT26945 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | WRKY | ||||||||
Protein Properties | Length: 117aa MW: 13545.2 Da PI: 5.8704 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 25 | 3.7e-08 | 88 | 103 | 2 | 17 |
--SS-EEEEEEE--TT CS WRKY 2 dDgynWrKYGqKevkg 17 dDgy+WrKYGqK++ g OIT26945 88 DDGYSWRKYGQKDILG 103 8************977 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 117 aa Download sequence |
MQIILSSFEN SLSILKWTDS ITQTQQIVVA PPPSISVDEI STKTDDLNGN FKDNDQDLRY 60 VSKKRKQLPT WTEQVRVSAE NGFEGPTDDG YSWRKYGQKD ILGYCNFVWT KRHSWLL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 58 | 66 | LRYVSKKRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G11070.1 | 9e-22 | WRKY family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT26945 |