PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT26936 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | MYB | ||||||||
Protein Properties | Length: 255aa MW: 29724.9 Da PI: 9.8185 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 44.3 | 4.2e-14 | 19 | 66 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W+ eEd++l+d++ ++G +W+ +r g+ Rt+k+c+ rw +yl OIT26936 19 KGAWSWEEDQKLKDYIMRYGIWNWSNMPRFAGLSRTGKSCRIRWMNYL 66 79******************99************************97 PP | |||||||
2 | Myb_DNA-binding | 44.8 | 2.9e-14 | 72 | 117 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+++ eE e ++ +qlG++ W++Ia++++ gRt+k++k++++++l OIT26936 72 KGPFSIEERETVIKMYQQLGTR-WSAIAAKLP-GRTDKDVKNFFYTHL 117 799*******************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 255 aa Download sequence |
MSSVPQQQQK STNMEEIKKG AWSWEEDQKL KDYIMRYGIW NWSNMPRFAG LSRTGKSCRI 60 RWMNYLHPEV KKGPFSIEER ETVIKMYQQL GTRWSAIAAK LPGRTDKDVK NFFYTHLKKH 120 LGMKNDALLK FKARRKRVEK TKKSEKKINP EFEKAQERPI LLLAINNLTI GTSSNNSLIS 180 PDVSSSNSSI ITFEENQKMN NVDDQPIIDM ENTVILESNP ETHLSDHSLS IESMDQFDTS 240 SFWFHLLNDA HRLIL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G21440.1 | 7e-44 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT26936 |