PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT26741 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | TCP | ||||||||
Protein Properties | Length: 253aa MW: 28074.2 Da PI: 8.5162 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 123 | 3.5e-38 | 36 | 162 | 2 | 126 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt............ssssaseceaesssssasnsssg.. 88 +g+kdrhsk++T++g+RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++akpai+el+++ s+s+a+ + + OIT26741 36 TGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKPAIDELAELpawkpslgsvsvSASAANTS--------------Nle 122 79**************************************************************44444333322211111111..............111 PP TCP 89 .kaaksaa.kskksqksaasalnlakesrakarararert 126 +++++++ + +++++ ++ + n a s+++a a+ r++t OIT26741 123 qDQSQDENfTFHQENATTSLFDNAAGPSNKRAMATLRNET 162 1222222212233333333333333344444444444433 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 253 aa Download sequence |
MGDSQHQNHR TTSRLGIRST VGEIVEVQGG HIVRSTGRKD RHSKVCTAKG PRDRRVRLSA 60 HTAIQFYDVQ DRLGYDRPSK AVDWLIKKAK PAIDELAELP AWKPSLGSVS VSASAANTSN 120 LEQDQSQDEN FTFHQENATT SLFDNAAGPS NKRAMATLRN ETNTSGSFLP PSLESDAIAD 180 TIKSFFPMGS STATNSSAMQ FQSFHQETNN MLSRTSIQNQ DLRLSLQFQD PILLHHQNQH 240 PNKTYATEIL LLL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G15030.2 | 5e-72 | TCP family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT26741 |