PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT26699 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | ERF | ||||||||
Protein Properties | Length: 196aa MW: 21139.6 Da PI: 4.995 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.1 | 2.2e-18 | 26 | 77 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 + y+G+r++k++g+Wv+eIr+p r r++lg+f tae+Aa a++ a+ +l+g OIT26699 26 PVYRGIRRRKSSGKWVSEIREP-----RspNRIWLGTFPTAEMAAVAYDVAAIALKG 77 68*******************9.....4489**********************9988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 196 aa Download sequence |
MATYGGSSTN IGGSATAPNN YSGRHPVYRG IRRRKSSGKW VSEIREPRSP NRIWLGTFPT 60 AEMAAVAYDV AAIALKGRDT DLNFPNSAAS LPVPATSSPR DIQAAAASAA AAVGAAGDAI 120 LARREVHDQK SKLVSENLGF ENNYEFMDED LIFDMPNVLV NMAEGMLLSP PRFNLPDDDI 180 AAAAEYTAYQ NLWNYP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G36450.1 | 5e-45 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT26699 |