PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT26639 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | MYB_related | ||||||||
Protein Properties | Length: 97aa MW: 11250.6 Da PI: 9.6434 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 28.6 | 3.2e-09 | 6 | 53 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47 WT++ +++ +a + + ++ +W+ a+ +g g+t++++k ++ k+ OIT26639 6 TWTPQQNKKFENALAIYDKDtpdRWRNLAKAVGGGKTEEDVKIHYEKL 53 7********************************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 97 aa Download sequence |
MASNSTWTPQ QNKKFENALA IYDKDTPDRW RNLAKAVGGG KTEEDVKIHY EKLVEDIKRI 60 ESGQVPLPKY NKPNGGHNNK GYSFNDEEQR LRYLKLQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G39250.1 | 5e-31 | MYB_related family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT26639 |