PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT26510
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family WRKY
Protein Properties Length: 274aa    MW: 30003.2 Da    PI: 5.8596
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT26510genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY93.71.4e-2978135359
               -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
      WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
               D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers+ dp+++ itY +eHnh+
  OIT26510  78 DSWSWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRLDPTTLLITYCSEHNHQ 135
               99************************998****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    
MEDRLNRRST PFFIKQEDST GTPPDNAADS PFSGDEAAEV NMPSPTKSRR GAKKKVITVP  60
IIDADGSRSK GEVYPPPDSW SWRKYGQKPI KGSPYPRGYY RCSSSKGCPA RKQVERSRLD  120
PTTLLITYCS EHNHQFPAAT TKHHHHHPLA TSTPTTPTTS TNTAGENNAA TAATDVTMTD  180
KSSPEECDVF AYQHDNGFSE LAGELGWFSD VGTPTFMENT SSMVGSTWRD ADVALMLPIR  240
EEDQSLFGDL GELPECSVVF RRYSVEAPCC GGTG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29280.11e-58WRKY family protein