PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT26448

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

ARR-B

Protein Properties

Length: 652aa MW: 70826.6 Da PI: 6.7374

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT26448	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	89.6	2.9e-28	209	262	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv+av+qL G++kA+Pk+ilelm+v+gLt+e+v+SHLQk+Rl OIT26448 209 KPRVVWSVELHQQFVSAVNQL-GIDKAVPKRILELMNVPGLTRENVASHLQKFRL 262 79*****************.******************************8 PP
2	Myb_DNA-binding	40.3	7.5e-13	211	261	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e+++++v av+qlG + +k+I + m+ g+t++++ s++qk++ OIT26448 211 RVVWSVELHQQFVSAVNQLGIDkaVPKRILELMNvPGLTRENVASHLQKFR 261 678**********************************************97 PP
3	Response_reg	77	7e-26	25	133	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 vl+vdD+ + +++l+q+l+k +y +v+++++++ al+ll+e++ +D++l D+ mp+mdG++ll+ e++lp+i++++ g +++ + ++ Ga OIT26448 25 VLVVDDDIVCLRILEQMLRKCKY-SVTTCTQATVALNLLRERRgsFDVVLSDVHMPDMDGFKLLELVGL-EMDLPVIMMSGDGRTNLVMRGVQHGAC 119 89*******************.***********999999***************87754.558******************** PP EEEESS--HHHHHH CS Response_reg 96 dflsKpfdpeelvk 109 d+l Kp+ eel + OIT26448 120 DYLIKPIRDEELKN 133 *********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 652 aa Download sequence
MASMSGDGAT CKSEATDKFP VGLRVLVVDD DIVCLRILEQ MLRKCKYSVT TCTQATVALN 60 LLRERRGSFD VVLSDVHMPD MDGFKLLELV GLEMDLPVIM MSGDGRTNLV MRGVQHGACD 120 YLIKPIRDEE LKNIWQHVVR KKCSFSKDPE YSGSLDDNDR HKRGNDDAEC ASSVIEGADA 180 VLKPQKKKRD AKEEDGTEME NDDPTTAKKP RVVWSVELHQ QFVSAVNQLG IDKAVPKRIL 240 ELMNVPGLTR ENVASHLQKF RLYLKRLSGV AQQQGGFPST YCGPIEQNPK LGSLGRFDIQ 300 ALAASGQIPP ETLTALHAEL LGRSTSNLVL PSVEQPDLLQ TSLQQAKCIP VDHVVAYGQP 360 LMKCPPSISN SKHLSQPMMS AEDVHSGFGS WRAKNIYMVP SSNLTELAAP DSNMLMAMMQ 420 HQQQWQKQQQ LEQQQKQSGL PEANHSINVK PSCLVLPSQL PGNFQVGDSP GPISQASSLG 480 KSSVIDYSVL SPQSNNSSGV VQVLDRELKP ACGLNGFTAA ASFSPSVSSV HAENSAGIQL 540 HNSSSAFGAS KQLPGLVPNN LGFPVSCNSK SSQVLDQGPK RNPGAGKAAS IPSRFAVDES 600 DSLMCNFSTA IIYPEDTKVK QEPNMNIMQN AKVGPAIFQK FPSGDLMSVF SD

Sequence ? help Back to Top

Protein Sequence Length: 652 aa Download sequence

MASMSGDGAT CKSEATDKFP VGLRVLVVDD DIVCLRILEQ MLRKCKYSVT TCTQATVALN  60
LLRERRGSFD VVLSDVHMPD MDGFKLLELV GLEMDLPVIM MSGDGRTNLV MRGVQHGACD  120
YLIKPIRDEE LKNIWQHVVR KKCSFSKDPE YSGSLDDNDR HKRGNDDAEC ASSVIEGADA  180
VLKPQKKKRD AKEEDGTEME NDDPTTAKKP RVVWSVELHQ QFVSAVNQLG IDKAVPKRIL  240
ELMNVPGLTR ENVASHLQKF RLYLKRLSGV AQQQGGFPST YCGPIEQNPK LGSLGRFDIQ  300
ALAASGQIPP ETLTALHAEL LGRSTSNLVL PSVEQPDLLQ TSLQQAKCIP VDHVVAYGQP  360
LMKCPPSISN SKHLSQPMMS AEDVHSGFGS WRAKNIYMVP SSNLTELAAP DSNMLMAMMQ  420
HQQQWQKQQQ LEQQQKQSGL PEANHSINVK PSCLVLPSQL PGNFQVGDSP GPISQASSLG  480
KSSVIDYSVL SPQSNNSSGV VQVLDRELKP ACGLNGFTAA ASFSPSVSSV HAENSAGIQL  540
HNSSSAFGAS KQLPGLVPNN LGFPVSCNSK SSQVLDQGPK RNPGAGKAAS IPSRFAVDES  600
DSLMCNFSTA IIYPEDTKVK QEPNMNIMQN AKVGPAIFQK FPSGDLMSVF SD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G16857.1	1e-116	ARR-B family protein

Link Out ? help Back to Top
Ensembl	OIT26448