PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT26275
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family G2-like
Protein Properties Length: 414aa    MW: 46384 Da    PI: 6.7516
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT26275genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like104.94.8e-334498155
   G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
              kprl+Wt +LHerF+eav+qLGG++kAtPk++l+lm+++gLtl+h+kSHLQkYRl
  OIT26275 44 KPRLKWTADLHERFIEAVNQLGGADKATPKSVLKLMGIQGLTLYHLKSHLQKYRL 98
              79****************************************************8 PP
2Myb_DNA-binding61.61.6e-194697148
                     TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48
                     r++WT++++e++++av+qlGg    t+k++ + mg +g+tl+++ks++qky+
         OIT26275 46 RLKWTADLHERFIEAVNQLGGAdkaTPKSVLKLMGiQGLTLYHLKSHLQKYR 97
                     89******************99*****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 414 aa     Download sequence    
MYHQHHQAAN MHPSTRMSFP ERHLFLQGGN VNGDSGLVLS TDAKPRLKWT ADLHERFIEA  60
VNQLGGADKA TPKSVLKLMG IQGLTLYHLK SHLQKYRLSK NLHGQANISG ANKSAAGIEK  120
ICESTGTPMS NPSIGPQQNN NIPISEAIQM QIEVQRRLHE QLEVQRHLQL RIEAQGKYLQ  180
AVLEKAQETL GTQNLGTIGL EAAKDQLSDL VSKVSNQCLN SAFSEIEELS GFHTPQTQAT  240
PPADCSMDSC LTSSERPLRD LREMHNNQIG LRPLNFGPCT KDIENETRLQ QAELRWRDDL  300
KENRKLFPKM DGDSEKEFTK ETNWSNLSMN IGLQGGKRNV STSYFDGRLN GIDADSKLFH  360
QSSERSDSMK PEKQISSREY ELPYFAPKLD LNADDQTDAA SSCKQLDLNG FSWS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04030.31e-126G2-like family protein