PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT26181

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

G2-like

Protein Properties

Length: 344aa MW: 40414.4 Da PI: 10.2999

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT26181	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	97	1.4e-30	56	109	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH +Fv+a+e+LGG+e+AtPk +l++m+v gL+++hvkSHLQ+YR+ OIT26181 56 PRLRWTPDLHLSFVRAIERLGGQERATPKLVLQTMNVRGLSIAHVKSHLQMYRS 109 8****************************************************7 PP
2	Myb_DNA-binding	47.4	4.3e-15	57	108	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+++++ +v+a+++lGg t+k++ +tm+ g++ ++ks++q+y+ OIT26181 57 RLRWTPDLHLSFVRAIERLGGQeraTPKLVLQTMNvRGLSIAHVKSHLQMYR 108 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 344 aa Download sequence
MEKMSYSIDL NEEANNKRET DDMIEKTAEG NSSSEDIGNY ENKSNRVRQY VRSKLPRLRW 60 TPDLHLSFVR AIERLGGQER ATPKLVLQTM NVRGLSIAHV KSHLQMYRSK KLGEFGQVLG 120 HGHRAMQGKS YFYGNLSQRF NPIQDFKMKN GAIVLARNFN DDDNVNHHFQ NSFARPRHET 180 KEKISRYLEW TSNQGTNNLF RMKILQNGNH EIGPVRQSHF LEEKRWPPIS EFKENQYWKE 240 KRVSLSNISS NKNSQSLFQQ NNFVQQPKWR WRYNSLEPKF ETPFRPEMKR DKRLSEKDWL 300 PDLQLGLSTV DNNKEQIQHS KKESDSTINT MLSLSLPSYS SSAT

Sequence ? help Back to Top

Protein Sequence Length: 344 aa Download sequence

MEKMSYSIDL NEEANNKRET DDMIEKTAEG NSSSEDIGNY ENKSNRVRQY VRSKLPRLRW  60
TPDLHLSFVR AIERLGGQER ATPKLVLQTM NVRGLSIAHV KSHLQMYRSK KLGEFGQVLG  120
HGHRAMQGKS YFYGNLSQRF NPIQDFKMKN GAIVLARNFN DDDNVNHHFQ NSFARPRHET  180
KEKISRYLEW TSNQGTNNLF RMKILQNGNH EIGPVRQSHF LEEKRWPPIS EFKENQYWKE  240
KRVSLSNISS NKNSQSLFQQ NNFVQQPKWR WRYNSLEPKF ETPFRPEMKR DKRLSEKDWL  300
PDLQLGLSTV DNNKEQIQHS KKESDSTINT MLSLSLPSYS SSAT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	4e-38	G2-like family protein

Link Out ? help Back to Top
Ensembl	OIT26181