PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT25994
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family Dof
Protein Properties Length: 289aa    MW: 31343.9 Da    PI: 9.109
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT25994genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof124.92.6e-3968127362
    zf-Dof   3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 
               e+ lkcprCdstntkfCy+nnyslsqPr+fCk+CrryWt+GGa+rnvPvGgg+r+nk+s+
  OIT25994  68 EAGLKCPRCDSTNTKFCYFNNYSLSQPRHFCKSCRRYWTRGGAMRNVPVGGGCRRNKRSK 127
               6779*****************************************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    
MIFSSFPVYL DHPNLQQLQQ PDHQGNPGLE NPQLPPPPPP AQVGGGLGSI RPGSMVDRAR  60
MAKIPLPEAG LKCPRCDSTN TKFCYFNNYS LSQPRHFCKS CRRYWTRGGA MRNVPVGGGC  120
RRNKRSKSSN NNNNNISKPA GGQMGNSNVI ISTSASPSSC SMEIIGHQFS QPSTQFTPLM  180
AAFHNLNNYG GGCTEMGFQI ANNNNNNNLL PSLAANFDHT TNLYPFQVQG ENTIEASNGV  240
SQVSPPVKME SNSTKQFLGS LENNQYWGGA NSWTGFSGLN NSSTTSHLL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37590.12e-42Dof family protein