PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT25522 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | B3 | ||||||||
Protein Properties | Length: 107aa MW: 12984 Da PI: 5.9786 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 34.8 | 3e-11 | 6 | 86 | 3 | 90 |
EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS B3 3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 vl++ ++ ++ + +pk f e+ + s + + +g+ W +++ + +++r ++++GWk Fv n++k g + F+l++ +ef OIT25522 6 EVLMKDSYIMQDYMHIPKYFYEHLPE----SHSTAVLHYDGEPWFMEI--NMGKRR-WFKDGWKYFVMNNNIKRGWLINFELVEITEF 86 5677888888899********55542....234677888*********..777666.79**********************9865665 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 107 aa Download sequence |
MNPSFEVLMK DSYIMQDYMH IPKYFYEHLP ESHSTAVLHY DGEPWFMEIN MGKRRWFKDG 60 WKYFVMNNNI KRGWLINFEL VEITEFCVIF QLHVTGRGTL QDPVEIN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G18990.1 | 2e-06 | B3 family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT25522 |