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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | OIT25275 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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| Family | bHLH | ||||||||
| Protein Properties | Length: 84aa MW: 9491.95 Da PI: 10.3238 | ||||||||
| Description | bHLH family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | HLH | 15.8 | 2.6e-05 | 25 | 53 | 12 | 45 |
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHH CS
HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLe 45
+ N+ f++Lr+llP+ +K +Ka++L
OIT25275 25 YATSTNENFQQLRSLLPPG-----TKKDKASVLA 53
55678************96.....5777777775 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 84 aa Download sequence |
MLNRSMTFFK NLYLMRRQEQ IQVNYATSTN ENFQQLRSLL PPGTKKDKAS VLATTTFCGI 60 ASYSKGKMQH IGFGYSFVGI LESG |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT5G56960.1 | 1e-08 | bHLH family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | OIT25275 |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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