PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT24454
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family B3
Protein Properties Length: 493aa    MW: 54874.8 Da    PI: 7.0059
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT24454genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B354.81.7e-1731119197
               EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
        B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
               ffkv+   d   s+ l++p +fa+  ++   ++++  led+sg++W+v +  + ++g+  +++GW  F +++gLk gDf+vF++++ + f    ++f
  OIT24454  31 FFKVM--IDKRFSKVLYFPPRFARLVSHL--TNQETYLEDSSGQKWKVGI--CIHKGSLAIREGWHAFSSEHGLKIGDFLVFHYIQGQHF--IAQIF 119
               88999..78888889********888655..4558***************..999999**************************987766..66666 PP
Sequence ? help Back to Top
Protein Sequence    Length: 493 aa     Download sequence    
MVHQNEACEK CTQTCLLIHG QRDPSPIVNS FFKVMIDKRF SKVLYFPPRF ARLVSHLTNQ  60
ETYLEDSSGQ KWKVGICIHK GSLAIREGWH AFSSEHGLKI GDFLVFHYIQ GQHFIAQIFG  120
TSGCQKISFD NGTRTGKKRR RTNCKATSQD ELLPETDINS RKKWNSTPSD TAVPESEMAD  180
HEAVTTTFAS TIDADTGILE IVPEAEAISD ILQGENGPRN HVSTNSISQR ESSLVDEVPV  240
EMELLSFQAP VHFLDIGITQ TEKISEPVND ILLLGQKDEN VHNMGLISST SSAENSGKGS  300
HLVLPSNKES RCSNQATREK SNEASHIDRR ELKEMAAKTD CSAKKLNGKE PKIIEKDGQG  360
FLTAVSGNNK VIKSEPADSG DTSFPDAGNF SCLLRVDGRN FLELPQSWPQ VLTGRKKLEH  420
ITIYLQGPDD RPWPVTYHER AGTKVLASRW ALFSAAYGIK PGDECRFQVL NLSERRFKVH  480
IGHKLDVTQT SLS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18960.11e-11B3 family protein