PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT23991
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 365aa    MW: 40125.6 Da    PI: 5.3806
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT23991genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.44.7e-20185234255
       AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                y+GVr+++ +g+WvAeIr p++   r+r +lg+f+taeeAa a+++a+  l+g
  OIT23991 185 LYRGVRQRH-WGKWVAEIRLPKN---RTRLWLGTFDTAEEAALAYDKAAYMLRG 234
               59******9.**********965...5**********************99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 365 aa     Download sequence    
MAAAMDFWNS TPVDVHSTSE SIITSGGELM EALEPFMKSD SSSPSSNFPP SISTPFPSSD  60
FHSFPSFPPP LPTPTISYPY TSSFYQTTPQ PMGSDSCSTS TTENTQIFST GFSGYGMEQP  120
GSIGLNQLTP AQIQQIQAQI NFQTQQQQQQ QQQMMFHHHA STMNLLGPKP VQMKQSGSPP  180
KPTKLYRGVR QRHWGKWVAE IRLPKNRTRL WLGTFDTAEE AALAYDKAAY MLRGDFARLN  240
FPHLRHNGSL IGGEFGDYNP LHSSVDAKLK EICQSLAEGK SIDSKKKKTS KGSSAAAVVK  300
MEEEESKAVE GGSETEGSGS GSGGSSPVTD LTFPEFTEEE STWDMCSENF MLQKYPSHEI  360
DWASL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78080.11e-61ERF family protein