PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT23984 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | Whirly | ||||||||
Protein Properties | Length: 241aa MW: 26651.5 Da PI: 10.6556 | ||||||||
Description | Whirly family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Whirly | 201.2 | 1.3e-62 | 65 | 203 | 1 | 139 |
Whirly 1 svyktkaalkvkavrptfealdsgnlklkraGglllelanataerkydWekkqsfalsatevaelvdlaskesceffhdpaakgsneGkvrkalkvePlpd 101 sv+k+kaal+ ++++ptf++ldsg +kl+r+G ++l++ ++++erkydWek+q falsatev++l+++++++sceffhdp++ +sn+G+vrk+l+ +P +d OIT23984 65 SVFKGKAALSAEPRLPTFSKLDSGGVKLNRRGVIMLTFWPSVGERKYDWEKRQLFALSATEVGSLISIGTRDSCEFFHDPSMLSSNAGQVRKSLSFKPNAD 165 79*************************************************************************************************** PP Whirly 102 GsGlfvnlsvtnslvkgnesfsvPvskaefavlrsllv 139 GsG+fv+lsv n+ +k+n++f+vPv+ aefav+r++++ OIT23984 166 GSGYFVSLSVVNNNLKTNDRFTVPVTTAEFAVMRTAFS 203 ***********************************995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 241 aa Download sequence |
MAILKLAGLL RPSRNQLLHK RLPGEGVRDS IWQHAINTLA GFSTVRQNIV ADAGKLTGRV 60 FAPYSVFKGK AALSAEPRLP TFSKLDSGGV KLNRRGVIML TFWPSVGERK YDWEKRQLFA 120 LSATEVGSLI SIGTRDSCEF FHDPSMLSSN AGQVRKSLSF KPNADGSGYF VSLSVVNNNL 180 KTNDRFTVPV TTAEFAVMRT AFSFALPHIM GWDRFTNQPS ESVSQSPSKV VPQLTEAEWD 240 R |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G71260.1 | 7e-92 | Whirly family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT23984 |