PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT23679 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | DBB | ||||||||
Protein Properties | Length: 176aa MW: 19604.3 Da PI: 6.6891 | ||||||||
Description | DBB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-B_box | 23.6 | 1.1e-07 | 4 | 33 | 5 | 34 |
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeH 34 C+ +e+ ++lfC ++ lC+ C ++ H OIT23679 4 LCDVCESAAAILFCAADEAALCRACDEKVH 33 7**************************998 PP | |||||||
2 | zf-B_box | 30.8 | 6.2e-10 | 53 | 92 | 3 | 38 |
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg....Ht 38 ++C+ +e+ ++ ++Ce +++ lC +C + +H g H+ OIT23679 53 VPRCDICENAPAFFYCEVDGSSLCLQCDMIIHVGgkrtHS 92 689*****************************66666675 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 176 aa Download sequence |
MRTLCDVCES AAAILFCAAD EAALCRACDE KVHMCNKLAS RHVRVGLAKP DDVPRCDICE 60 NAPAFFYCEV DGSSLCLQCD MIIHVGGKRT HSRYLLLRQK VEFPGDKPGP TEELACKTLD 120 PSENKREYSH SPKPMVEDNQ QNRRFSPVPV SDGSADDHAK KDKMIDLNVK PSHYHG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38960.1 | 5e-73 | DBB family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT23679 |