PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT23511 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | ERF | ||||||||
Protein Properties | Length: 186aa MW: 20707.2 Da PI: 4.7788 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.2 | 3.6e-17 | 23 | 72 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+G+r++ +Wv+eIr+p++ ++r++lg++ t+e+Aa+a++ a+++l+g OIT23511 23 SVYRGIRRRN--RKWVSEIREPRK---TTRIWLGTYPTPEMAAAAYDVAALALKG 72 78****9765..6********843...5************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 186 aa Download sequence |
MWSNHCPSNS TAISNRSEQG RHSVYRGIRR RNRKWVSEIR EPRKTTRIWL GTYPTPEMAA 60 AAYDVAALAL KGPDTPLNFP DSMCSYTMPA SLTAADIRAA AANAAAVRAP QLESEEARHQ 120 AECQPEAGDE GAMGQEYFDE EEVFGMPRLL VDMAEAMLVS PPRMKTTPYD ELPECSDASY 180 TLWSYP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52020.1 | 9e-39 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT23511 |