PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT23510 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | ARR-B | ||||||||
Protein Properties | Length: 617aa MW: 68554 Da PI: 6.1438 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 74.9 | 1.1e-23 | 203 | 256 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k++++Wt+ LH++F+ea++ + G +kA Pk+il+ mkv+gLt+++v+SHLQkYR+ OIT23510 203 KTKVVWTSSLHNKFLEAIRDI-GFDKAAPKKILDQMKVPGLTRANVASHLQKYRI 256 6799*****************.********************************6 PP | |||||||
2 | Myb_DNA-binding | 30.1 | 1.1e-09 | 206 | 255 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT ++ ++++a++ G + +k+I m g+t+ ++ s++qky+ OIT23510 206 VVWTSSLHNKFLEAIRDIGFDkaAPKKILDQMKvPGLTRANVASHLQKYR 255 68***********************************************7 PP | |||||||
3 | Response_reg | 71.1 | 4.4e-24 | 13 | 121 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 +l+vdD+ + +++++ +l+k +y +v +++++ +al +l+ k +Dl+++D+ mp+m+G+el + i+ e +lp+++++a ++e ++l+ l+ Ga OIT23510 13 ILVVDDDVVCLSIVAMILKKCKY-QVMTVKHPMDALSILRIKGgsFDLVVVDVHMPDMNGFELQQVITDEF-ELPVVLMSADDKEGTILKGLDGGAA 107 89*********************.***************666666**********************9999.9************************ PP EEEESS--HHHHHH CS Response_reg 96 dflsKpfdpeelvk 109 fl+Kp++ ++l++ OIT23510 108 FFLVKPISVDDLRD 121 ***********987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 617 aa Download sequence |
MEVETLINKS ISILVVDDDV VCLSIVAMIL KKCKYQVMTV KHPMDALSIL RIKGGSFDLV 60 VVDVHMPDMN GFELQQVITD EFELPVVLMS ADDKEGTILK GLDGGAAFFL VKPISVDDLR 120 DLWQYSLLQK KKGKRVLLEE IDCLEKSSTC NKKSLHEVRE SASSINENCY QHIKKEKSKR 180 KPARTQRNAD KDNSGNSAAP FKKTKVVWTS SLHNKFLEAI RDIGFDKAAP KKILDQMKVP 240 GLTRANVASH LQKYRIFLER VSDACCRIQA ADTSLAIKAV QSTSASGMLS QEKFGLQKQF 300 SENTTNPRSL IHTANNGSSS FRTQQTRQTI PSGYEQAQLF LNEGNLGNIT HSNGNPLYKA 360 NQLTSTMKAN NYQTGSSAYE DISSQLMNGS TSTQVHRMLS GNPANRLSDR NLLALGTNGI 420 TEHATLNGNL NFLRDGLADD QCGTNFTQNN YADEASTLFA GPMNFIGKSQ HDSEQCFAQE 480 ASSSVRFDGE KKCSAILSDH IDEETYMQLP SFVNNVCRGQ EVEAMLDQVC NFSEFHNIND 540 TQQSRGIGDL SVSFVNQGNV QPHQRHHRIG HTEPVEDGMS QLHNVFSYPT EQSKDEEFLE 600 LVLASSPYED DQNPDGL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G16110.1 | 2e-50 | ARR-B family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT23510 |