PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT22810
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 297aa    MW: 32166.7 Da    PI: 4.8574
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT22810genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.31.6e-1780129255
       AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                y GVr +  +g+Wv+eIr+p++   + r++lg+f t+e+Aa+a++ a+ +++g
  OIT22810  80 SYVGVRKRA-WGKWVSEIREPKK---KSRIWLGTFATPEMAARAHDVAAMSIKG 129
               79****887.**********854...6**********************99876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    
MAEPTTPNSE SESSSYNSCS LSSAISSSSV LIKNINSKNR LKRCREEEEE NDGQTNISKC  60
SNSSKKNGGN KTNDGSKHPS YVGVRKRAWG KWVSEIREPK KKSRIWLGTF ATPEMAARAH  120
DVAAMSIKGG SAILNFPQLA DLLPRPATCS PRDVQAAAVK AAHMDHLNPT ESSPAASAAS  180
MTSSSSSLSL VSGITSSSLC DDESMPPELE AEIPPPAAAV LAPQHEELSE IVKLPKLDTS  240
YDSVESTQEV LRFIESDWWD YGTNCEYYFG GENINMGFTT GLEAVVSNSF ESFLWQN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.14e-46ERF family protein