PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OIT22706 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 174aa MW: 20270.8 Da PI: 6.6387 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 36.8 | 9.2e-12 | 2 | 46 | 2 | 44 |
SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44 +WT eEd+l+ +a +++ + +W +Ia +++ g+t ++++ ++ OIT22706 2 SKWTREEDKLFEHALVLYPENiadRWQLIADHVP-GKTIEDIIAHY 46 58********************************.**********9 PP | |||||||
2 | Myb_DNA-binding | 47.1 | 5.6e-15 | 87 | 131 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ l++ + +++G+g+W++I+r + +Rt+ q+ s+ qky OIT22706 87 PWTEEEHRLFLIGLEKYGKGDWRSISRNVVVTRTPTQVASHAQKY 131 8*******************************************9 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 174 aa Download sequence |
MSKWTREEDK LFEHALVLYP ENIADRWQLI ADHVPGKTIE DIIAHYDDLV HDLLEIDSGR 60 IELPTYTDDP VESNKKNIEI ERKKGTPWTE EEHRLFLIGL EKYGKGDWRS ISRNVVVTRT 120 PTQVASHAQK YFIRQQAMKK ERKRSSIHDI TTAGDTNPVP PQSSFQNQRG NFTM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G04760.1 | 4e-69 | MYB family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | OIT22706 |