PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OIT22647 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 130aa MW: 14853.5 Da PI: 5.334 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 62.6 | 8.6e-20 | 15 | 67 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56 +y+GVr ++ +g+++AeIrd +++ r++lg+f taeeAa+a+++a+ +++g+ OIT22647 15 KYRGVRKRP-WGKFAAEIRDtSRQG--GVRVWLGTFTTAEEAARAYDKAAYSMRGN 67 8********.**********44334..4*************************995 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 130 aa Download sequence |
MDERGKIKDT TEEVKYRGVR KRPWGKFAAE IRDTSRQGGV RVWLGTFTTA EEAARAYDKA 60 AYSMRGNLAI LNFPEEYNLP SSSSHFNTGS SSMVSSSVQE RNEQVLELEY LDDKLLEELL 120 DCDEHANKRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G43410.1 | 2e-23 | ERF family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | OIT22647 |