PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT22459 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | ERF | ||||||||
Protein Properties | Length: 192aa MW: 21830.4 Da PI: 5.4661 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 62 | 1.4e-19 | 56 | 107 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 +y GVr ++ +g+++AeIrd + ng r++lg+f+taeeAa a+++a+ +++g+ OIT22459 56 KYIGVRKRP-WGKYAAEIRDSTRNG--IRVWLGTFDTAEEAAMAYDQAAFSMRGA 107 89*******.**********44465..*************************995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 192 aa Download sequence |
MEHLKNQYQT QTSNVYIVAE EVKVKVEAES SIETNSSKER ETNDEEVNFN PKNPQKYIGV 60 RKRPWGKYAA EIRDSTRNGI RVWLGTFDTA EEAAMAYDQA AFSMRGAQTC LNFPVEKVRE 120 SLQKMECNNL KDGLLSPAAA LKEKHKKRNS SSSRKKQVNI IKEEENVFIF EDLGPDLLDE 180 LLSSENSSCS NC |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 144 | 156 | KHKKRNSSSSRKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G31230.1 | 2e-30 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT22459 |