PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT22314
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 265aa    MW: 29753.1 Da    PI: 5.079
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT22314genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP267.72.2e-2193142255
       AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
               +y+G+r+++ +g+W+AeIrdp     +  r++lg+f taeeAa+a+++a+k+++g
  OIT22314  93 KYRGIRQRP-WGKWAAEIRDPQ----KgVRVWLGTFNTAEEAARAYDEAAKRIRG 142
               8********.**********94....35************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    
MCGGAIISDY EPVGNRCRKI TARDLWAELD PISDFWSSSS SSSIAGKADS AQSPTHSYNK  60
LKKSDSGKLN QLEKGTSMKV EKERSGPRPR KNKYRGIRQR PWGKWAAEIR DPQKGVRVWL  120
GTFNTAEEAA RAYDEAAKRI RGDKAKLNFP EPPSTPSPPA KRQCTSTIPD QPTLLESSDL  180
MSEKPASMMN FGYENQTPYY PMEMAAAEDP QHHDYELNEQ ISNLESFLDL EPDSSQFSGI  240
VDSDPLNICL MDDFAATQQQ EQLFY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16770.12e-43ERF family protein