PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT22137
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ZF-HD
Protein Properties Length: 358aa    MW: 39220.8 Da    PI: 8.6973
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT22137genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer111.73.7e-3569126359
  ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRrevee 59 
                   v YkeClkNhAaslGghavDGCgEfmps++++ +++++lkCaACgCHRnFHRre+ee
     OIT22137  69 VVIYKECLKNHAASLGGHAVDGCGEFMPSPTANpADPTSLKCAACGCHRNFHRREPEE 126
                  589******************************9*********************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 358 aa     Download sequence    
MDLTNNTSTT TTSTPTLTNT TTITTTSAHI KTPEAEIETP TQIQKPKPFS FSNGVLKRKN  60
LFQHHHPVVV IYKECLKNHA ASLGGHAVDG CGEFMPSPTA NPADPTSLKC AACGCHRNFH  120
RREPEEPVVI PPPPIATAAL EYQPHHRHHP PPPPPPLPRG DHSSPNSPSP PPISSAYYPA  180
SAPHMLLALS AGFSGEKNHN PISSPVVNTS NSNGRKRFRT KFTPDQKVKM LEFAERVGWK  240
MQKRDEDLVR SFCNEIGVEK GVLKVWMHNN KNTFGKKLDQ HHLADININN NGNSTNVVNG  300
FCIVSRNNNS HHHNSTDSAE FHLHHHESSN DDNKIIDHIK SVSTANVVGA TNGSSSSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28920.18e-66ZF-HD family protein