PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT22093
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family WRKY
Protein Properties Length: 350aa    MW: 39456.5 Da    PI: 6.9387
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT22093genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY81.96.7e-26189245459
               SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
      WRKY   4 gynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                ++WrKYGqK++kgs fpr+Y+rC+++ +C  +k++e+s + p+++++ Y+geHnh+
  OIT22093 189 TWAWRKYGQKPIKGSLFPRNYFRCSTSkDCDGRKHIEKSPRHPNLFIVAYSGEHNHP 245
               699*********************9988****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    
MGDNNWNLGA VVRSYNIRPS HDTNKVEVPS LGLESLTFEN DDDWNFFHSL LDVDRDDDIM  60
TFECLTDIFS RNEQKPDASQ PSFVSVPIAD EVKNDQNHQQ LLLQPIQLPA QQTQPIPPPS  120
PAAAVCVPAA APQQVILQKL NPCPVLKRAK VRPTITVSIR NPIIQIRRRK NQPEKTVYEV  180
SQEELIDFTW AWRKYGQKPI KGSLFPRNYF RCSTSKDCDG RKHIEKSPRH PNLFIVAYSG  240
EHNHPPPANR CTLSDSTNSK PKSKKLPKGI NIVPRRSLSF NSSSSNDSGS RPISPNMNEM  300
VVEETKADNE EEEEKVVPIP NNFMTEDIIK SSEELNGITT AAPKFAHLMA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52830.13e-33WRKY family protein