PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT21817
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family SRS
Protein Properties Length: 376aa    MW: 41372.2 Da    PI: 7.409
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT21817genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF70224.29.4e-085286539
    DUF702  5 tasCqdCGnqakkdCaheRCRtCCksrgfdCathv 39
              + +C  CGn a+  C ++ C+ CC      C+ hv
  OIT21817 52 KPKCIKCGNVARSRCPFQSCKSCCAKAQNPCHIHV 86
              568*******************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 376 aa     Download sequence    
MAAAASSPAL SNHSTDSAPA PASSTAAPTV TAAVVSSHPS INASKNLRGL NKPKCIKCGN  60
VARSRCPFQS CKSCCAKAQN PCHIHVLKGG STLPDKLPSS GSPVVDQQST EVSHPGSSHR  120
GAASLRQLST NFAQFNNLQT PLRSRKPLTR KDAQLINEWR FMKLKEYRDS NIAAENEAFD  180
RYMQNVGLLE EVFAVNSAED EKNEDGSTGD DNEATVNRLK LQLRSDPTRI ENTRKRMQYI  240
VDQGLRKLRK LDSGDNATDL SDLDALGKKK KAKSAEAEWV VSFTDLIDKL NKARNEEDLK  300
ACWEMKSQLF NQNKKEKQAE SDDAEASIEQ SSKASVMPTM PSGNSPPKWF STSTIDDEEL  360
RRLNAQFDSL EDIEEL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32730.15e-92SRS family protein