PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT21611
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family B3
Protein Properties Length: 286aa    MW: 33093.7 Da    PI: 10.304
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT21611genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B331.43.2e-1022991494
              T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
        B3 14 grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94
              + + +p  f++e+++k +++  l+     g sW+ k+ +r +s+ ++ ++ W +Fv  ++L+ gD+++F l+++s+f  +v
  OIT21611 22 DKILMPPVFIKENKKKLAKTCLLKTDVAAGMSWQAKI-VRENSCYFICEGEWPKFVAHHKLELGDILLFFLVDKSTF--HV 99
              44678999*****777666667777779*********.799999**************************9987777..44 PP
2B337.83.5e-121982681688
               EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--.TT-EEEEEE-SS.S CS
        B3  16 lvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLk.egDfvvFkldgr.s 88 
               +++p +fa+  g++k +  ++tl + +g++W+v +  +  + r+++++GW  F k+n++   g+++ Fkl++  +
  OIT21611 198 VTIPMTFARWSGIIKMK--KITLINGEGKKWKVDI--EHIGPRVLIKGGWAAFRKQNKIAaNGETCRFKLIQGrR 268
               69******999999655..8***************..999999****************989*******996424 PP
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    
MLVDPDKYPS FCKLLFRQGF MDKILMPPVF IKENKKKLAK TCLLKTDVAA GMSWQAKIVR  60
ENSCYFICEG EWPKFVAHHK LELGDILLFF LVDKSTFHVL PYGQKSCKNL CRRQLFEELS  120
SSSEEEEERD VGIRLSRKSK KVKTEPKESP GVAEEEEEEA QNGSKENGRK TLRYSVVNLK  180
NQNPYYEMAV RKTHSLFVTI PMTFARWSGI IKMKKITLIN GEGKKWKVDI EHIGPRVLIK  240
GGWAAFRKQN KIAANGETCR FKLIQGRRRG RGRRCYVLQV EKISKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31680.12e-09B3 family protein