PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OIT21495 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 226aa MW: 25212.8 Da PI: 8.1472 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59.1 | 1.1e-18 | 16 | 66 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr + +g+Wv+eIr+p++ + r++lg+f t+e+Aa+a++ a+++++g OIT21495 16 TVYRGVRMRN-WGKWVSEIREPRK---KSRIWLGTFPTPEMAARAHDVAALAIKG 66 57*****998.**********843...6***********************9987 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 226 aa Download sequence |
MEVKKIKRIR ESNKHTVYRG VRMRNWGKWV SEIREPRKKS RIWLGTFPTP EMAARAHDVA 60 ALAIKGNDAT LNFPELANSL PRPKSLTPRD IQAAATKAAS MQNSDSSCKI DTCIRVGCLH 120 HTSCDAAFPR TIRECKILRA PSCSLSSTLS TSSSLLPTNS AMTDLGTTSD ELTQIIELPR 180 LETIFDDLFD LKNDFLCADY PSPWLSCDGE LGTISSCFEP SLLWNY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G11590.1 | 4e-55 | ERF family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | OIT21495 |