PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT21264
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bHLH
Protein Properties Length: 332aa    MW: 37926.8 Da    PI: 7.4078
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT21264genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.72.5e-09189236455
               HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
       HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
               +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  OIT21264 189 SHSLAERARREKISKKMKYLQDLVPGC----NKVTGKAGMLDEIINYVQSLQ 236
               8*************************9....677*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    
MLSCGEMSVL ERQRAVLERL YSQSKQQLSS LPLQNLAQFN NLITEQMMGS LDVPIDQRMN  60
ENFTNFNMFG REHDKGIIGY GFTNNWQETA RPTFSTVSNS SITTVSPPPE KEIDTIVAPR  120
GNVVSTKKRK AEQFSEEEDC KIKRPQSEIS EKSQRAASGN NSKENSKTSE VQKPDYIHVR  180
ARRGQATDSH SLAERARREK ISKKMKYLQD LVPGCNKVTG KAGMLDEIIN YVQSLQKQVE  240
FLSMKLATLN PRLDLNTDNF FTKDFPSYMS NFPTIDVPTF SEYNLIQHQQ MLPQRRENCL  300
MSFPEADSSP ITVVQQQPNF ETDLQSLFQC QL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G18300.23e-57bHLH family protein