PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT21179 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | ERF | ||||||||
Protein Properties | Length: 219aa MW: 24982.8 Da PI: 4.7559 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 56.6 | 6.3e-18 | 88 | 138 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr ++ +g+++AeIrd + ng r+++g+f++ae Aa a+++a+ +++g OIT21179 88 NYRGVRKRP-WGKFAAEIRDSTRNG--VRVWIGTFDSAEAAALAYDQAAFAMRG 138 59*******.**********44465..*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 219 aa Download sequence |
MDSSFMHYQN PYDQNYSPES SSWDELLFHQ NSLPFNVNDT EDMFLCNLVA EGDRIVVKES 60 STETINSSSS SGTKEEEVTS CEPEKEKNYR GVRKRPWGKF AAEIRDSTRN GVRVWIGTFD 120 SAEAAALAYD QAAFAMRGSL AILNFPVEIV KESLSEMKCR FDEGCSPVIE LKKKHSMRKK 180 TQSRRNRVRK DESNVVVFED LGAEYLEELL SSSECVTNW |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 184 | 190 | RRNRVRK |
2 | 184 | 191 | RRNRVRKD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23240.1 | 4e-49 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT21179 |