PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT21063

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

WOX

Protein Properties

Length: 263aa MW: 28626.7 Da PI: 5.6972

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT21063	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	48.2	1.8e-15	23	83	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+++++eq+ +Le+ F++ +p ++e ++ k l + +++V++WFqNrR + ++ OIT21063 23 RSRWNPKPEQILILESIFNSgMVNPPKDETVRIRKILeqfgAVGDANVFYWFQNRRSRSRR 83 89***************99***********************************997 PP
2	Wus_type_Homeobox	107.3	9.3e-35	22	85	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +r+RW+P+peQi iLe++++sG+++P+k+e+ ri++ Le++G+++d+NVfyWFQNr++R+r++q OIT21063 22 VRSRWNPKPEQILILESIFNSGMVNPPKDETVRIRKILEQFGAVGDANVFYWFQNRRSRSRRRQ 85 589***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 263 aa Download sequence
MEKEAQDSTS SNQSNSERNE PVRSRWNPKP EQILILESIF NSGMVNPPKD ETVRIRKILE 60 QFGAVGDANV FYWFQNRRSR SRRRQRQIQA SLNATSDNSR NGGEQAAKCS NGGAIHFDTS 120 TGNFGPSSIS FPMAAPSNYL VLGSSSSCCG GDMGNANDGT DGLFPFSGQM GLPKIEQNSS 180 VSSILSSPED NANLHYQTGF ITVFINGVAT EVPRGPLDMK SMFGQEDLAL YHSSGVPVPV 240 NEFGFVVQSL QHGESYFLVS RPA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G03660.1	3e-74	WOX family protein

Link Out ? help Back to Top
Ensembl	OIT21063