PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT21019

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

G2-like

Protein Properties

Length: 466aa MW: 51244.5 Da PI: 6.415

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT21019	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106.3	1.8e-33	240	294	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr+rWtpeLHe Fveav++LGGsekAtPk +l+lm+v++Lt++hvkSHLQkYR+ OIT21019 240 KPRMRWTPELHEVFVEAVNKLGGSEKATPKGVLKLMNVESLTIYHVKSHLQKYRT 294 79****************************************************8 PP
2	Myb_DNA-binding	53.8	4.4e-17	242	293	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e +v+av++lGg t+k + + m+ + +t +++ks++qky+ OIT21019 242 RMRWTPELHEVFVEAVNKLGGSekaTPKGVLKLMNvESLTIYHVKSHLQKYR 293 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 466 aa Download sequence
MRPALYMPRS SEAQHSSMGV SGATPTSLPS LSKLEERFPK LPDSLHVISE KELTTSFISP 60 RAISSTSKSG TVGHLLSSTS GPHRDFHFLP SSPQETRPRY YPFISSGASM SPSQATHLSL 120 HSTSLNTDPL ENHKQNSFHE FLAFPTNVPV QNGQVESLAS VMASDDGVKR SDWQDWADQL 180 INDDDTLGSS WSDILVDVNF SDPEPKLSEI PAKQPQLPPP APASSGQSCP VGSPSSSTSK 240 PRMRWTPELH EVFVEAVNKL GGSEKATPKG VLKLMNVESL TIYHVKSHLQ KYRTARYKPD 300 PSEGISEKKP TIVTEMPSLD LKTTMGITEA LKMQMEVQKQ LHEQLEIQRK LQLRIEEQGK 360 YLQMMFEKTK NMGKELNVSS SKSDEPPSPS IEINHSPPVD KSDAPEQDHV SVGLGSSDAS 420 RSLEDLTKNN ERKSPKRKAC ENHDMDVRGL GSLPADGAKS EEMSPS

Sequence ? help Back to Top

Protein Sequence Length: 466 aa Download sequence

MRPALYMPRS SEAQHSSMGV SGATPTSLPS LSKLEERFPK LPDSLHVISE KELTTSFISP  60
RAISSTSKSG TVGHLLSSTS GPHRDFHFLP SSPQETRPRY YPFISSGASM SPSQATHLSL  120
HSTSLNTDPL ENHKQNSFHE FLAFPTNVPV QNGQVESLAS VMASDDGVKR SDWQDWADQL  180
INDDDTLGSS WSDILVDVNF SDPEPKLSEI PAKQPQLPPP APASSGQSCP VGSPSSSTSK  240
PRMRWTPELH EVFVEAVNKL GGSEKATPKG VLKLMNVESL TIYHVKSHLQ KYRTARYKPD  300
PSEGISEKKP TIVTEMPSLD LKTTMGITEA LKMQMEVQKQ LHEQLEIQRK LQLRIEEQGK  360
YLQMMFEKTK NMGKELNVSS SKSDEPPSPS IEINHSPPVD KSDAPEQDHV SVGLGSSDAS  420
RSLEDLTKNN ERKSPKRKAC ENHDMDVRGL GSLPADGAKS EEMSPS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28610.1	2e-84	G2-like family protein

Link Out ? help Back to Top
Ensembl	OIT21019