PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT21017 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | ERF | ||||||||
Protein Properties | Length: 220aa MW: 25352.3 Da PI: 7.6165 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.6 | 3.7e-19 | 95 | 145 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr ++ +g+++AeIrd + ng r++lg+f taeeAa a+++a+++++g OIT21017 95 HYTGVRKRP-WGKYAAEIRDSTRNG--MRVWLGTFNTAEEAALAYDQAALSMRG 145 8********.**********44465..*************************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 220 aa Download sequence |
MEMEFSSPQI QYPNFNFFQY QSPLPWNNEL FLDHDHLTNY PWEIDSVNNK EDRQIPRSSS 60 SSDVTNSSKG SNYHEEEVTS QNSTQKKDTT KEEKHYTGVR KRPWGKYAAE IRDSTRNGMR 120 VWLGTFNTAE EAALAYDQAA LSMRGPLALL NFPMDKVRES LENIKYSCED GLSPAAVLKA 180 TNKMRCVKHR RNRKKKTVLV FQDLGADLLD ELLMSTSSQK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23240.1 | 7e-39 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT21017 |