PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT20984 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | B3 | ||||||||
Protein Properties | Length: 100aa MW: 11722.4 Da PI: 7.6577 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 35.2 | 2.2e-11 | 3 | 74 | 8 | 86 |
-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS B3 8 sdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 ++ + + l++p+k +h + +++ l + +g++W v++ + +++r +++GWk Fv +n++k g +v F+l++ OIT20984 3 DSYINYDDLYIPRKIY-KHLPP---TVETALLNYRGQEWYVNM--SVGDRR-RFKTGWKFFVLDNHVKRGFIVKFTLVD 74 45666778*******9.66323...35799*************..555544.3899********************875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 100 aa Download sequence |
MTDSYINYDD LYIPRKIYKH LPPTVETALL NYRGQEWYVN MSVGDRRRFK TGWKFFVLDN 60 HVKRGFIVKF TLVDVAPLYV DFNVELKGEG TSDNNPVGID |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G06220.1 | 5e-07 | B3 family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT20984 |