PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT20893 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | FAR1 | ||||||||
Protein Properties | Length: 183aa MW: 20750.7 Da PI: 8.1288 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 21.8 | 6.2e-07 | 3 | 39 | 55 | 91 |
FAR1 55 raetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 + ++r++C+a+++ k +++ w+v+ +++ H+Hel+p OIT20893 3 KYSKRVNCEARVNCKALSENLWCVILVNNLHSHELFP 39 6789*******************************86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 183 aa Download sequence |
NSKYSKRVNC EARVNCKALS ENLWCVILVN NLHSHELFPD LSYVMAAHRH VPLSLQRPLE 60 ANNRASAKIC TNFRTIEVLS GVPQEMRCTA NDCTNFIITS MKGLTKDGDT KLTLIFFLSS 120 SKQENDGFFH SIELDAQGRL KNVIWIHPQD KAGYGDFTDV ISFYTTYLVS GYNMLYVAFV 180 RVS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G76320.2 | 5e-17 | FAR1 family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT20893 |