PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT20875 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | ERF | ||||||||
Protein Properties | Length: 207aa MW: 22698.4 Da PI: 4.7522 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 52.8 | 9.5e-17 | 22 | 71 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + y+G+r ++ +g+Wv+eIr+p++ ++r++lg+f t+e+Aa+a++ a+++l+g OIT20875 22 PVYRGIR-CR-SGKWVSEIREPRK---TTRIWLGTFPTPEMAAAAYDVAALALKG 71 68****9.55.6*********843...5************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 207 aa Download sequence |
MADLSNIVVE NKQSTRTNTK HPVYRGIRCR SGKWVSEIRE PRKTTRIWLG TFPTPEMAAA 60 AYDVAALALK GSNNVVLNFP CHVNFYPKLP PSPSPADIRS AAATAAALMK KEAGEGTVVA 120 QQGDDDQLSR SSNGATYNEG DSVEFSSPES YNVQIGGKYV DEDDVFYMPS LIVDMAEAMM 180 MSPPRINSST CEDSRGDPSY IENLWSY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52020.1 | 1e-35 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT20875 |